Import bettr data from JSON format — bettrFromJSON • bettr

Import bettr data from a standardized JSON format and create a SummarizedExperiment object using assembleSE.

Usage

bettrFromJSON(file = NULL, json = NULL)

Arguments

file: Character scalar, path to the JSON file to import.
json: Character scalar, JSON string to parse. If provided, file is ignored.

Value

A SummarizedExperiment object that can be passed to bettr.

Author

Daniel Incicau

Examples

df <- data.frame(Method = c("M1", "M2", "M3"),
                 metric1 = c(1, 2, 3),
                 metric2 = c(3, 1, 2))
bettrSE <- assembleSE(df = df)
json_file <- tempfile(fileext = ".json")
bettrToJSON(bettrSE, file = json_file)
bettrSE_reload <- bettrFromJSON(file = json_file)